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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopen03g040830.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
Trihelix |
Protein Properties |
Length: 362aa MW: 40189.8 Da PI: 9.901 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen03g040830.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 51 | 3.7e-16 | 65 | 152 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspk...qCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W+++ + +Liea e+ +l+rg+lk+++W++v++ + +++ ++++pk qCk++++ ++k+yk +k + + s++p+fd+l+
Sopen03g040830.1 65 CWSEEATAVLIEAWGERYMELSRGNLKQKHWKDVADIVsSREDYRKTPKtdiQCKNRIDTVKKKYKLEKSKIAAG--QGPSKWPFFDKLD 152
7*************************************856666666644449*****************99997..56668******97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MENDEETQSG GSGSPESPRS NGRITVTVAS APPQNTLTLA LPIQQSRPAG ASGGGGGSGG 60 GREDCWSEEA TAVLIEAWGE RYMELSRGNL KQKHWKDVAD IVSSREDYRK TPKTDIQCKN 120 RIDTVKKKYK LEKSKIAAGQ GPSKWPFFDK LDMLIGPTAK INPTVAAGPS NLYSGNQHVP 180 MGIPMGVRSL PQLRQHQQLQ KQKQPSRKRP HMDSDTSESE SEPDLSPAST DSFPPGTFQK 240 KRPRFQKEML NSSALRQGGI GEASGNKNWG NSVRELTQAI LKFGEAYEQT ETAKLQQMVE 300 MEKQRMKFAK DMELQRMQFF MNTQLEISQL KHRRSENSNH HSNNHAAATS NHNNNNNSDN 360 SI
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Functional Description ? help
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Source |
Description |
UniProt | Transcription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G14180.1 | 2e-66 | sequence-specific DNA binding transcription factors |