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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sopen03g037140.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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| Family |
Trihelix |
| Protein Properties |
Length: 332aa MW: 37618.8 Da PI: 5.383 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sopen03g037140.1 | genome | spenn | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 72.6 | 7.1e-23 | 36 | 127 | 1 | 83 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83
rWt+qe+l+Li++++ eer rg+ + +p+W++vs+++r++g r+p+qC+++w+n+ ++kkik++e + s+s + +
Sopen03g037140.1 36 RWTRQETLVLIQGKKIAEERAHRGRkstsvfgsdKPEPKWDSVSSYCRQHGADRGPVQCRKRWSNMISDFKKIKTWETQAYGSSESYWIISN 127
8**************999999987556677777699******************************************98766666776555 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MSTLGSTEMN ENAATLADGQ QKLTEEGKSK TPRHSRWTRQ ETLVLIQGKK IAEERAHRGR 60
KSTSVFGSDK PEPKWDSVSS YCRQHGADRG PVQCRKRWSN MISDFKKIKT WETQAYGSSE 120
SYWIISNDLR REKRLPGSFD REVYNVLDGK EFTAEAYQLA LVTITTDEKL DYGVETVEEE 180
EAEEGEEEND NVSHTGEYTM EDDVMHPAAE EVGSSPLKEH IVIDKKAKSI PSPVPRSGTA 240
EGEQPGPDFW SSPMYKDRVK KRRLSPDGCI DSNLGYKLLK TLERNTNTLH SQLDAQMGNR 300
QREMEQQKEQ TNSLIDVLNK VADAVARVAD KM
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