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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopen03g035820.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
WRKY |
Protein Properties |
Length: 346aa MW: 38754.2 Da PI: 9.2046 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen03g035820.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 93.6 | 1.4e-29 | 167 | 227 | 1 | 60 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60
++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+k
Sopen03g035820.1 167 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFApTCPVKKKVQRSVEDQSILVATYEGEHNHSK 227
58***************************99****************************85 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 346 aa
Download sequence Send
to blast |
MEFTSLVDTS LDLNFRPLRV SDELPKQEVE SNFIGLGRDL VPVKDEASNL MEELKRVNAE 60 NKKLTEMLTV MCQNYNSLRN QLTEYMSKQN SSTSGADQDQ NSDGSKKIKI ENNNNNEIVK 120 SSVQVLNSES SSSDEDSSPK KPREEHIKTK TSRVYMRTEP SDTSLIVKDG YQWRKYGQKV 180 TRDNPSPRAY FKCSFAPTCP VKKKVQRSVE DQSILVATYE GEHNHSKVDT AGPVTTTSPS 240 SRFNPKNNTY AAAVMPRQTL TLDLAEPKTL QNDIKKVHSI TSTSSASGQK RKSPGTDQQQ 300 QNRPEFQHFL IEQMASSLTK DPSFQAALAA AISGKFLQNN SNTKDK
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FJ654291 | 0.0 | FJ654291.1 Solanum lycopersicum JA-induced WRKY protein mRNA, complete cds. |