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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sopen03g033540.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
ERF |
Protein Properties |
Length: 212aa MW: 24817.3 Da PI: 10.7236 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen03g033540.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 50.4 | 5.7e-16 | 32 | 81 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ GVr+++ +grWvAeI+ s ++ r +lg+f+ aeeAa a++ a++ l+g
Sopen03g033540.1 32 RFIGVRQRP-SGRWVAEIKQTS---QKLRLWLGTFDKAEEAAMAYDSAARLLRG 81
689******.7******99932...36***********************9998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 212 aa
Download sequence Send
to blast |
MENSQSPSKS LNNSSKNIQQ KINPISSNDG KRFIGVRQRP SGRWVAEIKQ TSQKLRLWLG 60 TFDKAEEAAM AYDSAARLLR GKSAKTNFNN HGIFKPNEEN YSLLEKDPRL YQLMKHAIMK 120 KFAGKYQNNE CLETEETENR NPDRCRNNVR RVKHWMQRFI DRFLLLYLSL FREQIDEPLP 180 PVFSPNKRTR TDQLSTLVSH RSNLKLTSKM TI
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