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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopen03g028890.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
NAC |
Protein Properties |
Length: 251aa MW: 29134.6 Da PI: 4.8479 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen03g028890.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 177.5 | 3.7e-55 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeelv++yLk+k++g+++el ++i+evd+yk+ePw+L k + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgkd++
Sopen03g028890.1 6 LPPGFRFHPTDEELVNYYLKRKIHGQEIEL-DIIPEVDLYKCEPWELAeKsFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRR 97
79****************************.99**************84335556888*********************************** PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
v+s +++++g+kktLv+y+grap+g +tdWvmheyrl
Sopen03g028890.1 98 VTS-QNRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRL 133
***.8999***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MAPVGLPPGF RFHPTDEELV NYYLKRKIHG QEIELDIIPE VDLYKCEPWE LAEKSFLPSR 60 DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVTS QNRAIGMKKT LVYYRGRAPQ 120 GIRTDWVMHE YRLDDKECDE ISSIQVDSYA LCRVFKKNGV CSDIEELGQP SINVPSFEYP 180 LTQGINNNNN IHHEQYQTPS PDVPLASSSC CIEEEEKDDS WMQFITEDVW CSSNSSFQQG 240 EDIPPLAFTN L
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor directing sieve element enucleation and cytosol degradation. Not required for formation of lytic vacuoles. Regulates, with NAC045, the transcription of NEN1, NEN2, NEN3, NEN4, RTM1, RTM2, UBP16, PLDZETA, ABCB10 and At1g26450. {ECO:0000269|PubMed:25081480}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975442 | 1e-177 | HG975442.1 Solanum pennellii chromosome ch03, complete genome. |