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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopen03g025700.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
WRKY |
Protein Properties |
Length: 272aa MW: 31378.9 Da PI: 6.0538 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen03g025700.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 69.3 | 5.4e-22 | 114 | 176 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTE.EEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkv.veitYegeHnhe 59
++Dg++WrKYGqK++ +s++pr YYrCt++ +C+++k+v+ +e+p + ++tY g+H+++
Sopen03g025700.1 114 MNDGCAWRKYGQKKILNSKYPRCYYRCTHKydqECRATKQVQIIQENPIImYHTTYFGNHTCN 176
58***************************99999***********99975168********97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009862 | Biological Process | systemic acquired resistance, salicylic acid mediated signaling pathway |
GO:0009864 | Biological Process | induced systemic resistance, jasmonic acid mediated signaling pathway |
GO:0010200 | Biological Process | response to chitin |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0050832 | Biological Process | defense response to fungus |
GO:1900056 | Biological Process | negative regulation of leaf senescence |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MEDFLGENPH NRLIKELVEG KSFTVQLQTL LKQPNESVLA EELIRKIWGS FTQAITVLNS 60 LGNSDNSLTQ GQIEEVDQPN SGSELKKKKE KQDRRGCYKR RKTSGSWMRE SETMNDGCAW 120 RKYGQKKILN SKYPRCYYRC THKYDQECRA TKQVQIIQEN PIIMYHTTYF GNHTCNSTKI 180 PKHTYNNHSM VKHSDSTVLK EEEEEEESKG QSDNVSSIVD SNLWQDFMPS SPSAHDSTLA 240 ANYSSSYYEE IISSHDMEDL AKFGEIEAIE FC
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 86 | 101 | KKKEKQDRRGCYKRRK |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in senescence, biotic and abiotic stress responses by modulating various phytohormones signaling pathways (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Required for the resistance (R) gene Mi-1-mediated resistance to potato aphid (e.g. M.euphorbiae) and root-knot nematode (e.g. M.javanica) (PubMed:21898085). {ECO:0000250|UniProtKB:Q9LY00, ECO:0000250|UniProtKB:Q9SUP6, ECO:0000269|PubMed:21898085}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced in response to potato aphid (e.g. M.euphorbiae) infestation and root-knot nematode (e.g. M.javanica) inoculation. Up-regulated by salicylic acid (SA) and suppressed by methyl jasmonate (MeJA). {ECO:0000269|PubMed:21898085}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KM062182 | 0.0 | KM062182.1 Solanum habrochaites cultivar EC520061 WRKY transcription factor mRNA, complete cds. |