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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sopen03g022550.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
WRKY |
Protein Properties |
Length: 246aa MW: 28145.8 Da PI: 6.3914 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen03g022550.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 74.4 | 1.4e-23 | 164 | 222 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D+++WrKYG K +s+f +sYYrC a +Cp+++++++s++dp+ v++tY+g+Hnh+
Sopen03g022550.1 164 ADQWRWRKYGMKRTGDSTFLKSYYRCNEAnDCPARRHIQKSSTDPNKVIVTYRGQHNHP 222
59*************************998****************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 246 aa
Download sequence Send
to blast |
MAENENENEN DWDLWAVVRS CGKRNNSVHD DMNVNNTSVF VDHSVHEDPT HGNSVNNTHQ 60 EETDGVGDFT DSFVTEHKHY FGLDEVISLS KNLNTNSRIE PHNQENQTET IPNTPLVVVE 120 HEEKKKKKVR FSMQISSTEA GKTFSYRGKS TERYEILAEK LSEADQWRWR KYGMKRTGDS 180 TFLKSYYRCN EANDCPARRH IQKSSTDPNK VIVTYRGQHN HPHIAMVHGS PNAAAPLEDP 240 SFPSST
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