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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sopen03g020850.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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| Family |
NAC |
| Protein Properties |
Length: 275aa MW: 31048.6 Da PI: 4.3232 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sopen03g020850.1 | genome | spenn | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 49.1 | 1.9e-15 | 2 | 54 | 75 | 128 |
NAM 75 nratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
nr+++ g+Wk tg+d++vl +++ vg ktLvf++g+ap+ ++tdW +heyr+
Sopen03g020850.1 2 NRTIEIGFWKITGRDRRVLY-DEKFVGSVKTLVFHQGKAPRVQRTDWAIHEYRF 54
89999***************.999****************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 275 aa
Download sequence Send
to blast |
MNRTIEIGFW KITGRDRRVL YDEKFVGSVK TLVFHQGKAP RVQRTDWAIH EYRFEDKNME 60
DAGFSLDAYV LSKVFKKSGP GPKNVAQYGA PFKEEDWEDN ETPAEHNQSS IPSLPLPDNE 120
TCSIVTQPYI HEMPAEPNSY GATSIPAMPD NLSCSVITTM VDRGNKYLWH LTEPGPSSAE 180
LYSKKMPQEK DDYMIQLFEN FIEDPAILFA GNEDNLGTND MNVEVASFIN GNVMHSNLGN 240
LDNCVELDQT TVDLSVFQGT DYSHDSIFFQ DVPSL
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-12 | 2 | 83 | 90 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-12 | 2 | 83 | 90 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-12 | 2 | 83 | 90 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-12 | 2 | 83 | 90 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-12 | 2 | 83 | 93 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 2e-12 | 2 | 83 | 93 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 2e-12 | 2 | 83 | 93 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 2e-12 | 2 | 83 | 93 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 2e-12 | 2 | 83 | 93 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 2e-12 | 2 | 83 | 93 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 2e-12 | 2 | 83 | 93 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 2e-12 | 2 | 83 | 93 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 2e-12 | 2 | 83 | 90 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 2e-12 | 2 | 83 | 90 | 171 | NAC domain-containing protein 19 |
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