 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sopen02g037620.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
| Family |
WRKY |
| Protein Properties |
Length: 319aa MW: 35504.3 Da PI: 10.1457 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sopen02g037620.1 | genome | spenn | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 100.7 | 8.9e-32 | 248 | 305 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYegeHnh+
Sopen02g037620.1 248 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPTMLIVTYEGEHNHS 305
99************************988****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 319 aa
Download sequence Send
to blast |
MAVELMMDYR STRNNNNTNC INFVAKLEEK SVVQEAASGL ESVEKLIRLL SQSQSQQIQQ 60
QNKSPVEIEM VAEAAVTKFK KVISLLDRNR TGHARFRRAP LPSNSSKDFV DTKVYSPTPI 120
QQVPLITYDH FNPLVPKTIS FSYSPEMSRT NSFNISSLTG ETESKQHSSS NSAFQMTNLS 180
SQVSNSAGKP PLSSSSLKRK CSLSENVVSG KCSGSSGRCH CSKRRKLRLK RVVRVPAISM 240
KLSDIPPDDY SWRKYGQKPI KGSPHPRGYY KCSSVRGCPA RKHVERALDD PTMLIVTYEG 300
EHNHSLSVAE TSSLILESS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
