 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sopen02g025550.2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
| Family |
G2-like |
| Protein Properties |
Length: 211aa MW: 23599.5 Da PI: 6.644 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sopen02g025550.2 | genome | spenn | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 106 | 2.1e-33 | 2 | 55 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWt++LH++Fv+ave+LGG+++AtPk +l+lm+vkgLt++hvkSHLQ+YR+
Sopen02g025550.2 2 PRLRWTHDLHRCFVHAVERLGGEDRATPKMVLQLMDVKGLTISHVKSHLQMYRS 55
8****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 211 aa
Download sequence Send
to blast |
MPRLRWTHDL HRCFVHAVER LGGEDRATPK MVLQLMDVKG LTISHVKSHL QMYRSMKHEQ 60
LMQVAEAANG SKSNKMDGPD QVHYPHGNFL HHYYNGHPNS TITSTYSYEI ASKPAFIPPA 120
PWKPMPKKMM GLEGRSDPAC NMFRDFFNGC TTVQDGSECD QYGSSLSNKH FSIIDTEEEA 180
QDSGSITMSA QPSAGLDDVN NNNISLDLTL G
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 7e-19 | 3 | 58 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 7e-19 | 3 | 58 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 7e-19 | 3 | 58 | 3 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 7e-19 | 3 | 58 | 3 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 7e-19 | 3 | 58 | 3 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 7e-19 | 3 | 58 | 3 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 7e-19 | 3 | 58 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 7e-19 | 3 | 58 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 7e-19 | 3 | 58 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 7e-19 | 3 | 58 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 7e-19 | 3 | 58 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 7e-19 | 3 | 58 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975441 | 4e-94 | HG975441.1 Solanum pennellii chromosome ch02, complete genome. |
