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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sopen02g020200.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
WRKY |
Protein Properties |
Length: 316aa MW: 36110.1 Da PI: 7.0027 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen02g020200.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 106.2 | 1.6e-33 | 168 | 225 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s++prsYYrCts++C+vkk+vers +dp++v++tYeg+Hnh+
Sopen02g020200.1 168 EDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCQVKKRVERSYQDPSIVITTYEGQHNHH 225
8********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 316 aa
Download sequence Send
to blast |
MGDELRDLYY HQPFQEDIKH DSSMVQNIHM LDPSFMSYTS EYLHGSSSDY ITNNSLGKPF 60 GFSTLSSLKD DDIIKQDHVD ANVNYISNNN DVVGGSETPV TPNSSISNSS SNGDHEDSNK 120 KDKQVKDETL EDGEDASKKE SKAKKKGEKK QRPPKFAFMT KSEVDHLEDG YRWRKYGQKA 180 VKNSPYPRSY YRCTSQKCQV KKRVERSYQD PSIVITTYEG QHNHHLPATL RGSVARMLNP 240 SMLAQPSPLM APQASFHQEF IMSQMPQFYG HANVFANSSM YHQNLNHQQM QLPHPHHDYG 300 LLQDMVPSVF NLKQEP
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