 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sopen01g038300.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
| Family |
NAC |
| Protein Properties |
Length: 196aa MW: 23056.2 Da PI: 4.9702 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sopen01g038300.1 | genome | spenn | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 35.9 | 2.2e-11 | 2 | 99 | 35 | 128 |
NAM 35 kevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkge....ktdW 121
++vd+y ePw++ + ++++ yf ++ +k++++ +r +r + + g+Wk + k+v++++g+l+g + + + ++++k+ +W
Sopen01g038300.1 2 QRVDLYAEkEPWEILE--GSNTNTGYFITPLKKEKSHHTRFKRtVGEGGTWKIQDPAKKVFDENGRLMGYVHRMKYTPANNKKAMikelFGEW 92
5678775439****62..2345577******************6666999***************************544444332222579* PP
NAM 122 vmheyrl 128
+m ey+l
Sopen01g038300.1 93 LMMEYSL 99
*****87 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 196 aa
Download sequence Send
to blast |
MQRVDLYAEK EPWEILEGSN TNTGYFITPL KKEKSHHTRF KRTVGEGGTW KIQDPAKKVF 60
DENGRLMGYV HRMKYTPANN KKAMIKELFG EWLMMEYSLY DRYVTNLRKK VVHKDFVICM 120
IKKKKKKQGC DDGKKKDENI MNEVEVNELI DSVMEELEEI DDDNREVDVG DDFLAALEDE 180
CSDANHINLD EYDFVI
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 107 | 126 | RKKVVHKDFVICMIKKKKKK |
| 2 | 122 | 134 | KKKKKQGCDDGKK |
