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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sopen01g035660.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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| Family |
Trihelix |
| Protein Properties |
Length: 329aa MW: 37233.4 Da PI: 9.4533 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sopen01g035660.1 | genome | spenn | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 59.2 | 1.1e-18 | 37 | 129 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf..erspkqCkekwenlnkrykkikegek....krtsessstcpyfdqle 86
+W+++e+ aLi+a+r+++ +lr+g+l++++W+ev++ + ++ ++ ++++qC++k+e+l+kry+++ +++ r+ + s +++f++++
Sopen01g035660.1 37 CWSHDETIALIDAYRDKWYSLRKGNLRANHWQEVAEDVgSRCPVdpPKTAVQCRHKMEKLRKRYRAEIQRAApyggARSHRYCSAWVHFKRMD 129
8*************************************7444554589*****************9998875111133445556777888876 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MATFSPSTQD FSTTPSQILS SSNVTVAVPS RRLPPPCWSH DETIALIDAY RDKWYSLRKG 60
NLRANHWQEV AEDVGSRCPV DPPKTAVQCR HKMEKLRKRY RAEIQRAAPY GGARSHRYCS 120
AWVHFKRMDM MERGPNAVSP PPSEDEADED VEDYHQNGVK LVGDLYGNNV HTGNRSSFQG 180
VVSNGGGGFR IRIPGMPGLA PPMAKPYSRF EEARVETPSN FGSSQMFRDG FVKKADLGKR 240
VVGEGVREKK KEDPMVEMVA AIKVLGDGFV RMERMKMDAA RELERMRMEM EMKRTEMILE 300
SQQRVVEAFA QALSEEKYKK AKRVPTPEC
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