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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sopen01g024140.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
WRKY |
Protein Properties |
Length: 408aa MW: 44661.2 Da PI: 4.8078 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen01g024140.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 102.1 | 3.2e-32 | 158 | 216 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDg++WrKYGqK vk+s+fprsY+rCt a+C vkk+vers+ dp++v++tYeg H+h+
Sopen01g024140.1 158 LDDGFRWRKYGQKAVKNSPFPRSYFRCTIATCGVKKRVERSSADPSTVITTYEGVHTHP 216
59********************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 408 aa
Download sequence Send
to blast |
MSAFFPDESS SFFFDFPLYE TENVSSSPMR LIESMFTSHD DPITDSSSLF DLLQPPPFPP 60 PPPPPPPPPP PPPPADVPLL NPSPIANTSA NSSELSSSST DVAANDDFLQ MIEMVEEQLE 120 NDEDKIEDNI QLIPKKKKAR KERAPRFAFM TKTEIDHLDD GFRWRKYGQK AVKNSPFPRS 180 YFRCTIATCG VKKRVERSSA DPSTVITTYE GVHTHPCPIT PRSSIGFYRD TIDYCGGGSI 240 GGVGLGLGGV ASSSSLFLPE FNYQAQQQQP STYFQARPAL PPINSFTTNS AQGGMLLPST 300 SSSFGTDDGL LQDMVISQMM PKQNQSTKAV GYSSETLGHD SAFGPTVRNS FFPETTYLFY 360 HIRSAAAEPL MISKAPTHLS LLKTLRLLFG DSMGTGQVET PFPESLIG
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