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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sopen01g023610.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
C2H2 |
Protein Properties |
Length: 172aa MW: 19665.4 Da PI: 9.4815 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen01g023610.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 15.3 | 5.6e-05 | 25 | 47 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C+ C +F+++ L H+++H
Sopen01g023610.1 25 YRCTTCRDVFTSSQGLAGHQNKH 47
9*********************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 172 aa
Download sequence Send
to blast |
MQQQPPTRGM DDQRIIPNPG GVWCYRCTTC RDVFTSSQGL AGHQNKHKSE GTWIRGAPHE 60 KFFCPSTELP ALYLQLGTRK STPTVLRGQG RFYHLRRRNQ TVYGPRRKPG RPWAALYEPQ 120 QTMVLQVAPV FEGASISALH IQDQNLFASR PNQLVEKTYI DDKEEIDLEL TL
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