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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sopen01g006750.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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| Family |
MYB |
| Protein Properties |
Length: 341aa MW: 38551.4 Da PI: 8.3226 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sopen01g006750.1 | genome | spenn | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 54.5 | 2.7e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd++l d++++ G g+W++ + + g++R++k+c++rw +yl
Sopen01g006750.1 14 KGPWTPEEDQKLMDYIEKNGCGSWRALPTKAGLKRCGKSCRLRWINYL 61
79********************************************97 PP
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| 2 | Myb_DNA-binding | 50.3 | 5.3e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+++ +E++ +++++++lG++ W++Ia ++ +Rt++++k++w+++l
Sopen01g006750.1 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLA-NRTDNEIKNYWNTHL 112
89********************.*********.************996 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MGRSPCCEKV GLKKGPWTPE EDQKLMDYIE KNGCGSWRAL PTKAGLKRCG KSCRLRWINY 60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLANRT DNEIKNYWNT HLKKRLTKMG 120
IDPNTHKPKS NIFGSANLSH MAQWEKARLE AEARLVRESK KQHQQIISNN NNNINNYNNI 180
HFSPNNLTTT TTTTNVLLPL QTKLPSPPCL DVLKAWQGGA NWSIMPKITK DNFFDNPPIS 240
TSNLSLIMVP NNNSITGAGL IDNSCLIGTE NFMENNINGI SYSNYPNLNT IQGFTHLDHV 300
LGSCEEEEDN DDNNDNNSND NNYWNTILKS CTSFVDGSSI F
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Functions as a repressor of epidermal cell outgrowth and negatively regulate trichome branch formation (PubMed:18805951, PubMed:21070410). Acts as both a positive and negative regulator of cellular outgrowth. Promotes both trichome expansion and branch formation (PubMed:21070410). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). May play a role in the regulation of cuticle formation in vegetative organs (PubMed:24169067). {ECO:0000269|PubMed:18805951, ECO:0000269|PubMed:21070410, ECO:0000269|PubMed:23709630, ECO:0000269|PubMed:24169067}. |
