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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sopen01g005060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family | bZIP | ||||||||
Protein Properties | Length: 182aa MW: 20612.8 Da PI: 7.5153 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.4 | 1.8e-14 | 112 | 165 | 5 | 58 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 kr+rr+++NR +A+rsR+RK+a+++eLe ++ eN++Lk+ +ee k+e k Sopen01g005060.1 112 KRQRRMIRNRASAQRSRARKQAYTAELEAQLEKVRDENERLKSIVEEKKEETTK 165 9**********************************************9998765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.0E-9 | 107 | 172 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.381 | 110 | 162 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.6E-14 | 112 | 165 | No hit | No description |
SuperFamily | SSF57959 | 8.13E-11 | 112 | 162 | No hit | No description |
Pfam | PF00170 | 2.7E-12 | 112 | 165 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 5.03E-15 | 112 | 158 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 115 | 130 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence Send to blast |
MDVSEEESVG CYKVQPPQVQ EGFSDNLPDS ASLNELFRHF YQPEGNEVGS NSTHEGFGLS 60 YGIDQIFEQA ADVIAPARGN AQNLNSDGSD AAGGGNRRRR AATIEQETLM EKRQRRMIRN 120 RASAQRSRAR KQAYTAELEA QLEKVRDENE RLKSIVEEKK EETTKAQWMA NKMKKLRRSV 180 SF |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG975440 | 1e-127 | HG975440.1 Solanum pennellii chromosome ch01, complete genome. | |||
GenBank | HG975513 | 1e-127 | HG975513.1 Solanum lycopersicum chromosome ch01, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015088261.1 | 1e-133 | ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
TrEMBL | A0A3Q7EAF8 | 1e-128 | A0A3Q7EAF8_SOLLC; Uncharacterized protein | ||||
STRING | Solyc01g009510.1.1 | 1e-110 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA18437 | 4 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44460.1 | 9e-09 | bZIP family protein |