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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Solyc12g036480.1.1 |
Common Name | LOC101257935 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
NAC |
Protein Properties |
Length: 327aa MW: 37080.4 Da PI: 6.6813 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc12g036480.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 176.9 | 5.4e-55 | 5 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeel+++yL++k+++ ++++ ++i++vd++k+ePwdLp+k++ +ekewyfFs +d+ky+tg r+nrat++gyWk+tgkdke
Solyc12g036480.1.1 5 LPPGFRFHPTDEELITCYLNNKISDFNFTT-RAIADVDLNKSEPWDLPAKASMGEKEWYFFSLKDRKYPTGLRTNRATEAGYWKTTGKDKE 94
79*************************999.89***************999999************************************* PP
NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+++ +g lvg+kktLvfy+grapkgekt+Wvmheyr+
Solyc12g036480.1.1 95 IYRGgTGVLVGMKKTLVFYRGRAPKGEKTNWVMHEYRI 132
***867778***************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MDENLPPGFR FHPTDEELIT CYLNNKISDF NFTTRAIADV DLNKSEPWDL PAKASMGEKE 60 WYFFSLKDRK YPTGLRTNRA TEAGYWKTTG KDKEIYRGGT GVLVGMKKTL VFYRGRAPKG 120 EKTNWVMHEY RIETTFGYKP SKEEWVVCRV FQKSSTVKKP QPTSSSPLSL ESPCDTNYTI 180 TNELGDIELP FNFNYLTTTP STAINNISLH NYNNDNINLA AATREANSHP LLPWSSNLLS 240 SNLSSVNSLL FRALQLKSYS PREQATTTHD YAFMLPQENI ITTQFGNDFA VNNIGAPSSS 300 TVLDNSVQQQ QQQQQEQSYK LDSNIW*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-55 | 4 | 159 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-55 | 4 | 159 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-55 | 4 | 159 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-55 | 4 | 159 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-55 | 4 | 159 | 19 | 174 | NAC domain-containing protein 19 |
3swm_B | 3e-55 | 4 | 159 | 19 | 174 | NAC domain-containing protein 19 |
3swm_C | 3e-55 | 4 | 159 | 19 | 174 | NAC domain-containing protein 19 |
3swm_D | 3e-55 | 4 | 159 | 19 | 174 | NAC domain-containing protein 19 |
3swp_A | 3e-55 | 4 | 159 | 19 | 174 | NAC domain-containing protein 19 |
3swp_B | 3e-55 | 4 | 159 | 19 | 174 | NAC domain-containing protein 19 |
3swp_C | 3e-55 | 4 | 159 | 19 | 174 | NAC domain-containing protein 19 |
3swp_D | 3e-55 | 4 | 159 | 19 | 174 | NAC domain-containing protein 19 |
4dul_A | 2e-55 | 4 | 159 | 16 | 171 | NAC domain-containing protein 19 |
4dul_B | 2e-55 | 4 | 159 | 16 | 171 | NAC domain-containing protein 19 |
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