|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Solyc12g011240.1.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
Family |
G2-like |
Protein Properties |
Length: 240aa MW: 27253.1 Da PI: 6.3957 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc12g011240.1.1 | genome | ITAG | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 49 | 1.3e-15 | 110 | 163 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+ Wt++LH++Fv +v+ GG+ + P++il+ m g++ ++k LQ YR
Solyc12g011240.1.1 110 PRMLWTEDLHRKFVAVVDAYGGPWVVKPRHILKEMTHLGISHCQIKNRLQSYRA 163
8****************************************************7 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 240 aa
Download sequence Send
to blast |
MFPLSPSPVV EIGNFQSPII PTMQLHYDEL MSLQQSQFYY QPVNDFSFLE NHGPMRLFGE 60 QNIINNNVVS YQDPFMLNPN VLNFNVAHQV QQELGQQPNN VGSTSRVKPP RMLWTEDLHR 120 KFVAVVDAYG GPWVVKPRHI LKEMTHLGIS HCQIKNRLQS YRAKLNPNDA GGRKCKASSK 180 KELIQDVQEQ LKNVDGGKAD DDVCIPQLPT EAEKTKAQIS PEDAFIEELL NWMVVKQDI*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP009275 | 1e-152 | Solanum lycopersicum genomic DNA, chromosome 8, clone: C08HBa0131P16, complete sequence |
GenBank | EU124736 | 1e-152 | Solanum lycopersicum clone C12HBa0143N09, complete sequence |