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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc12g011220.1.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
G2-like |
Protein Properties |
Length: 234aa MW: 26585.1 Da PI: 6.5083 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc12g011220.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 45.3 | 1.9e-14 | 110 | 163 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+ Wt eLH++F+++++ GG+ + P++i + m g++ ++k LQ+YR
Solyc12g011220.1.1 110 PRVLWTDELHRKFLDVINAYGGPWVVKPRHIWKEMAHLGVSHCQIKNRLQRYRA 163
89***************************************************7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 234 aa
Download sequence Send
to blast |
MIPLPPSPAV NIGNFQSPNI PTMQHCYDEL MSLQQSQFNY QPTNDFSFLE NHGLMRLFGG 60 QNTINNNVVG YQDPFMLNPN VINFNIAHQV QQELGQQLNN VGSASRIKPP RVLWTDELHR 120 KFLDVINAYG GPWVVKPRHI WKEMAHLGVS HCQIKNRLQR YRAKLNPNEA GGRKCKASSN 180 KELIQDVQEQ LNNVDGGKAD DNVYVPQLPT EAERMEAHIS PDDAFIEELL NWM*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP009275 | 1e-135 | Solanum lycopersicum genomic DNA, chromosome 8, clone: C08HBa0131P16, complete sequence |
GenBank | EU124736 | 1e-135 | Solanum lycopersicum clone C12HBa0143N09, complete sequence |