PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon

Family

bZIP

Protein Properties

Length: 307aa MW: 34993.9 Da PI: 5.4415

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Solyc12g010800.1.1	genome	ITAG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.9	6.6e-11	179	222	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 kr +r NR +A+rsR RK++++ eLe+ v +L+ae + L + Solyc12g010800.1.1 179 KRIKRILANRQSAQRSRVRKLQYVSELERSVTTLQAEVSVLSPR 222 899*********************************98877655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	7.1E-14	175	239	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.565	177	229	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.6E-9	179	223	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.13E-11	179	233	No hit	No description
Gene3D	G3DSA:1.20.5.170	5.0E-13	179	230	No hit	No description
CDD	cd14703	9.20E-22	180	230	No hit	No description
PROSITE pattern	PS00036	0	182	197	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence Send to blast
MAHLPPRAPN MTQNWPDFSL HQKMENLAPS AHNLWADEFL DMSSRRGSHR RSMSDSIAFL 60 ESPMVEECRR LSSTTPGSGG TTNGHDEFER FDDEQQIMSM FNDDVHDMSC SNPSSPSDYI 120 NVTEDKKMNG PDQMMMQRKS DQNEEVESSC KTNEELATAN QNASTNNNEY SSERVVDPKR 180 IKRILANRQS AQRSRVRKLQ YVSELERSVT TLQAEVSVLS PRVAFLDHQR LLLNVDNSAL 240 RQKIAALAQD KLFKDAHQEA LKVEIERLRQ IYYQQNMKQQ MDNNNTTPVA DSTNTPPEIK 300 VQLSEN*

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Les.7026	0.0	leaf\| root\| seed

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Solyc12g010800.1.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004251798.1	0.0	basic leucine zipper 34-like
Swissprot	Q9M2K4	2e-93	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	A0A3Q7J4S2	0.0	A0A3Q7J4S2_SOLLC; Uncharacterized protein
STRING	Solyc12g010800.1.1	0.0	(Solanum lycopersicum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1775	24	65
Representative plant	OGRP126	17	181

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	2e-74	bZIP family protein

Link Out ? help Back to Top
Phytozome	Solyc12g010800.1.1

Publications ? help Back to Top
Wang Y,van der Hoeven RS,Nielsen R,Mueller LA,Tanksley SD Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments. Theor. Appl. Genet., 2005. 112(1): p. 72-84 [PMID:16208505] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]