 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Solyc11g064950.1.1 |
Common Name | LOC101262685 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
Family |
bZIP |
Protein Properties |
Length: 325aa MW: 36170.9 Da PI: 9.0819 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc11g064950.1.1 | genome | ITAG | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 32.9 | 1.4e-10 | 37 | 80 | 2 | 45 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
k+ k rr+++NReAAr+sR+RKka++++Le +L++ ++L
Solyc11g064950.1.1 37 KDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQEL 80
567899*************************9888888777655 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009410 | Biological Process | response to xenobiotic stimulus |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005737 | Cellular Component | cytoplasm |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 325 aa
Download sequence Send
to blast |
MADISPSTST DADTEDKNRF LNQQLCAVAS DGSDRPKDQK TLRRLAQNRE AARKSRLRKK 60 AYVQQLESSR MKLTQLEQEL QRARQQGIFI SGSGDQSQSM SGNGALAFDV EYARWLEEQN 120 RRINELRGAV NSHAGDAELR IIVDGILAHY DDIFRIKGDA AKADVFHILS GMWKTPAERC 180 FLWLGGFRSS ELLKLLINQL EPLTEQQLLA INNLQQSSQQ AEDALSQGME ALQQSLAETL 240 AGSLGPSGSS GNVANYMGQM AMAMGKLGTL EGFIRQADNL RQQTLQQMHR ILTTRQSARA 300 LLAITDYFSR LRALSSLWLA RPRE*
|
Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Les.12355 | 0.0 | callus| cell culture| flower| fruit| leaf| root| stem| trichome |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC171735 | 1e-78 | Solanum lycopersicum chromosome 11 clone C11HBa0119D16, complete sequence |