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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Solyc11g051000.1.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
| Family |
FAR1 |
| Protein Properties |
Length: 193aa MW: 22518.6 Da PI: 10.0614 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Solyc11g051000.1.1 | genome | ITAG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 47.5 | 6.1e-15 | 2 | 62 | 29 | 90 |
FAR1 29 tkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
t+r+ +C+keg+ +k++ +++r+etrt+C a++ ++++++gk+ v+++e++HnH+l+
Solyc11g051000.1.1 2 TSRKITCYKEGYGGLDKRD-MLVKKPRKETRTSCLAHMIISRQSNGKFSVISFEEKHNHPLV 62
78999***********999.999*************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 193 aa
Download sequence Send
to blast |
MTSRKITCYK EGYGGLDKRD MLVKKPRKET RTSCLAHMII SRQSNGKFSV ISFEEKHNHP 60
LVHQSLGKAS LGFTKRDHKN YLRDKRKESL QYGVARSLVN YFEERYEANF LNAWEEILEK 120
CDLKDNSWLK NTFAIREKWS MSYGRNIFSA SMQSTQLSES FNGSLKGYLK SDLDIVQFFK 180
NFQRADDDKR AN*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC247075 | 1e-147 | Solanum lycopersicum strain Heinz 1706 chromosome 11 clone slm-22d4 map 11, complete sequence |
| GenBank | AC247140 | 1e-147 | Solanum lycopersicum strain Heinz 1706 chromosome 11 clone slm-57f15 map 11, complete sequence |
| GenBank | AC247141 | 1e-147 | Solanum lycopersicum strain Heinz 1706 chromosome 11 clone slm-10l5 map 11, complete sequence |
