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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Solyc11g012980.1.1 |
| Common Name | LOC101253047 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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| Family |
ERF |
| Protein Properties |
Length: 220aa MW: 24387.1 Da PI: 6.0009 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Solyc11g012980.1.1 | genome | ITAG | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 58.3 | 1.8e-18 | 30 | 79 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ykGVr ++ +g+Wv+eIr p ++++r++lg++ t+e Aa+a++aa ++l+g
Solyc11g012980.1.1 30 KYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 79
8*****998.**********9...336*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009751 | Biological Process | response to salicylic acid |
| GO:0009753 | Biological Process | response to jasmonic acid |
| GO:0034605 | Biological Process | cellular response to heat |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0071497 | Biological Process | cellular response to freezing |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 220 aa
Download sequence Send
to blast |
MVKTEQKSLS MSISSIATSN NNNMKTKKNK YKGVRMRSWG SWVSEIRAPN QKTRIWLGSY 60
STPEAAARAY DAALLCLKGP SASSNLNFPF NSTFYHHIDH HTCTTLSPKA IQRVAAAAAA 120
TPEQQNVGLV LSDNNNSTNP TISSPPQSST SSSEDINDGC LLSNINTFDQ EMSMIEQWYN 180
FDSPKYNDML HGTIFFDPPS MEEVYYEESS ADIPLWSFC*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed cotyledons, ovules and seeds of immature siliques. {ECO:0000269|PubMed:21069430}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430). Involved in salt and osmotic stress response pathways. May be regulated by the stress-related genes RD29A, RD22, DREB1A or P5CS during stress response (PubMed:27137403). Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:21069430, ECO:0000269|PubMed:27137403}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by jasmonate (JA) and ethylene. Down-regulated by freezing and heat stresses. {ECO:0000269|PubMed:21069430}. |
| Publications
? help Back to Top |
- Wang Y,van der Hoeven RS,Nielsen R,Mueller LA,Tanksley SD
Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments.
Theor. Appl. Genet., 2005. 112(1): p. 72-84
[PMID:16208505] - Kazama D,Kurusu T,Mitsuda N,Ohme-Takagi M,Tada Y
Involvement of elevated proline accumulation in enhanced osmotic stress tolerance in Arabidopsis conferred by chimeric repressor gene silencing technology.
Plant Signal Behav, 2014. 9(3): p. e28211
[PMID:24614501] - Kazama D, et al.
Identification of Chimeric Repressors that Confer Salt and Osmotic Stress Tolerance in Arabidopsis.
Plants (Basel), 2013. 2(4): p. 769-85
[PMID:27137403]
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