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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Solyc11g005610.1.1 |
| Common Name | LOC101262476 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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| Family |
GRAS |
| Protein Properties |
Length: 493aa MW: 56150 Da PI: 5.1999 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Solyc11g005610.1.1 | genome | ITAG | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 269.6 | 1e-82 | 112 | 477 | 3 | 373 |
GRAS 3 elLlecAeavssgdlelaqalLarlsel....aspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalklfsevs 88
+lLl Aea+++++l la+ ++ rl+++ + + +p++Rla yft+AL + ++ s++el l+ +++ +++++a+++++e+s
Solyc11g005610.1.1 112 DLLLMGAEAIEARNLDLASIIVLRLNTIlpnqENRENSPVERLALYFTQALLCKTLNnSSHELL-NLNQY---QSEFTSSMTAFQMLQEIS 198
789999********************996543444456************98776661333333.23333...3458899999******** PP
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefn 179
P++kf+h+taNqaIlea++g+++vHi+Dfdi +G+QWp+L+ L +R + slRiT ++s +++++ +e+tg+rL++fA+++++pf f+
Solyc11g005610.1.1 199 PYVKFAHFTANQAILEATKGSQQVHILDFDIIEGIQWPPLMVDLVERGNTNSSLRITSLVS-DHSNSCHVEKTGQRLQEFANSINLPFMFD 288
*************************************************************.667999*********************** PP
GRAS 180 vlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe....adhnsesFlerflealeyysa 266
++ ++le+l + v+ + +l+ n++++ +++++ sl + ++ + +++lsPk+vv+ve+e ++ +s +F+e f+eal++y++
Solyc11g005610.1.1 289 QILLEDLEKL---QVVVEGHNNLIANVMIHQLHMPQRGSSLVK---TFFNGLRKLSPKLVVLVEEElfnlSKISSMPFVEFFCEALHHYTT 373
*966655555...777888**********99999988888888...********************8776666999*************** PP
GRAS 267 lfdsleaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerlee.aGFkpvplsekaakqaklllrkvksdgyrveees 355
++ds+ +++ + +++E+e+l+ +i + + + +++ er++ W++ l + GF+++p+s++++ qak+l++ ++ gy v++e+
Solyc11g005610.1.1 374 IYDSILGGFGGGYkLALRVIEKEFLRVRILDSLRQFPSDKLERER----WSKGLYSlKGFRQIPMSSSNVRQAKHLVSLFS-GGYWVQNEQ 459
*****6666665538999*********************777766....**9987658***********************.89******* PP
GRAS 356 gslvlgWkdrpLvsvSaW 373
l l+Wk+rpL+s+S W
Solyc11g005610.1.1 460 SKLALCWKSRPLTSASIW 477
****************** PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 493 aa
Download sequence Send
to blast |
MECENFQPNY INPYIEYSNL ETTFSWNNPS IINPQCSIQD FVTIVNDVDI LDYFPNDFDF 60
IDGDVDIPLQ NTQQKIIQGD TELSREGQKS RVCNPRLKFL QDHLMEETSV TDLLLMGAEA 120
IEARNLDLAS IIVLRLNTIL PNQENRENSP VERLALYFTQ ALLCKTLNNS SHELLNLNQY 180
QSEFTSSMTA FQMLQEISPY VKFAHFTANQ AILEATKGSQ QVHILDFDII EGIQWPPLMV 240
DLVERGNTNS SLRITSLVSD HSNSCHVEKT GQRLQEFANS INLPFMFDQI LLEDLEKLQV 300
VVEGHNNLIA NVMIHQLHMP QRGSSLVKTF FNGLRKLSPK LVVLVEEELF NLSKISSMPF 360
VEFFCEALHH YTTIYDSILG GFGGGYKLAL RVIEKEFLRV RILDSLRQFP SDKLERERWS 420
KGLYSLKGFR QIPMSSSNVR QAKHLVSLFS GGYWVQNEQS KLALCWKSRP LTSASIWVPI 480
SSTSSPSSSI SF*
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