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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Solyc10g086260.1.1 |
| Common Name | ANT1 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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| Family |
MYB |
| Protein Properties |
Length: 275aa MW: 31906.1 Da PI: 5.4676 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Solyc10g086260.1.1 | genome | ITAG | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 51.4 | 2.5e-16 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT eEd ll +++ ++G g W++++ + g++R++k+c++rw++yl
Solyc10g086260.1.1 13 KGSWTDEEDFLLRKCIDKYGEGKWHLVPIRAGLNRCRKSCRLRWLNYL 60
799*******************************************97 PP
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| 2 | Myb_DNA-binding | 45.7 | 1.6e-14 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg + ++E +l+++++k+lG++ W++Ia +++ gRt++++k++w++
Solyc10g086260.1.1 66 RGDFEQDEVDLILRLHKLLGNR-WSLIAGRLP-GRTANDVKNYWNTN 110
78999*****************.*********.***********986 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 275 aa
Download sequence Send
to blast |
MNSTSMSSLG VRKGSWTDEE DFLLRKCIDK YGEGKWHLVP IRAGLNRCRK SCRLRWLNYL 60
RPHIKRGDFE QDEVDLILRL HKLLGNRWSL IAGRLPGRTA NDVKNYWNTN LLRKLNTTKI 120
VPREKINNKC GEISTKIEII KPQRRKYFSS TMKNVTNNNV ILDEEEHCKE IISEKQTPDA 180
SMDNVDPWWI NLLENCNDDI EEDEEVVINY EKTLTSLLHE EISPPLNIGE GNSMQQGQIS 240
HENWGEFSLN LPPMQQGVQN DDFSAEIDLW NLLD*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator, when associated with BHLH002/EGL3/MYC146, BHLH012/MYC1, or BHLH042/TT8. {ECO:0000269|PubMed:15361138}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY348870 | 0.0 | Lycopersicon esculentum anthocyanin 1 (ANT1) mRNA, complete cds |
| GenBank | EF433416 | 0.0 | Solanum lycopersicum cultivar Ailsa Craig anthocyanin 1 (ANT1) mRNA, complete cds |
| Publications
? help Back to Top |
- Mathews H, et al.
Activation tagging in tomato identifies a transcriptional regulator of anthocyanin biosynthesis, modification, and transport.
Plant Cell, 2003. 15(8): p. 1689-703
[PMID:12897245] - Wang Y,van der Hoeven RS,Nielsen R,Mueller LA,Tanksley SD
Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments.
Theor. Appl. Genet., 2005. 112(1): p. 72-84
[PMID:16208505] - Sapir M, et al.
Molecular aspects of Anthocyanin fruit tomato in relation to high pigment-1.
J. Hered., 2008 May-Jun. 99(3): p. 292-303
[PMID:18344529] - Li T, et al.
Jasmonic acid enhancement of anthocyanin accumulation is dependent on phytochrome A signaling pathway under far-red light in Arabidopsis.
Biochem. Biophys. Res. Commun., 2014. 454(1): p. 78-83
[PMID:25450360] - Mondal SK,Roy S
Genome-wide sequential, evolutionary, organizational and expression analyses of phenylpropanoid biosynthesis associated MYB domain transcription factors in Arabidopsis.
J. Biomol. Struct. Dyn., 2018. 36(6): p. 1577-1601
[PMID:28490275]
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