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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc10g078970.1.1 |
Common Name | LOC104644359 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
C2H2 |
Protein Properties |
Length: 206aa MW: 23776.2 Da PI: 8.6616 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc10g078970.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 15.1 | 6.6e-05 | 79 | 101 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C +C +sF+++ L H++ H
Solyc10g078970.1.1 79 YECYYCFRSFPTSQALGGHQNAH 101
99******************988 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 206 aa
Download sequence Send
to blast |
MEKIGREAVD YMNMKSFSQP LRKKSIRLFG KEFSVGDSTN MSESTDKNPL HHEPKPNTMS 60 ISANRIDKTG HVDEISRKYE CYYCFRSFPT SQALGGHQNA HKKERQNAKL SHLQSSIVHE 120 TNRNRFGEPS TAATRLTHYH STWSNINNNN VYSPNYNEAF WQIPPTIHHY QNNINPPSSF 180 SHDSFFPNDE EKREVQNHVS LDLHL*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC244593 | 1e-145 | Solanum lycopersicum strain Heinz 1706 chromosome 10 clone hba-44a10 map 10, complete sequence |