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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc10g076380.1.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
ERF |
Protein Properties |
Length: 324aa MW: 36429.3 Da PI: 3.8478 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc10g076380.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64 | 3.2e-20 | 12 | 70 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpse...ng..krkrfslgkfgtaeeAakaaiaarkkleg 55
++y+GVr++ +g+WvAeIr+p ++ k kr +lg+f++a+eAa a+++a+k ++g
Solyc10g076380.1.1 12 CKYRGVRQRT-WGKWVAEIREPAYisgDNksKGKRLWLGSFDSADEAAIAYDEAAKVMYG 70
79*****999.**********655665335556***********************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MQGKGGPENS SCKYRGVRQR TWGKWVAEIR EPAYISGDNK SKGKRLWLGS FDSADEAAIA 60 YDEAAKVMYG SNATLNFPNY SSNGSITRTS SLELSGQSCV DHEDLVLDGS KNDEIESDLK 120 TSDTPNTDLS YDYVNHGSPA CSWNEEDLEV IMEENSKNEL IDSEFETPLT KEDEFVQCLN 180 FNDVSNTKNV NEDVGARLEY MEHCVMDDNC SMEATNVLDT FCLTENHDEA FDFQRFLEES 240 FDFKLNYAEQ FDCTYAYNQQ IDLQNSETDS EIRSDGIWKE QNLGGFGLDN FGASNSTQPE 300 DNIEDLSMFS SDFDVSSFLN DII*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF500011 | 4e-07 | Lycopersicon esculentum dehydration responsive element binding protein (DREB1) mRNA, complete cds |