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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Solyc10g053890.1.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
B3 |
Protein Properties |
Length: 167aa MW: 19263.4 Da PI: 6.7581 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc10g053890.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 49.6 | 6.9e-16 | 27 | 118 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91
ffkv+ + ++ l++p k a++ ++ ++ ++++ed+ gr+W ++ +++ g+ +++GW +F +++Lk+g+f+vF++++ ++ +
Solyc10g053890.1.1 27 FFKVM--ILETFLQVLCFPPKIARSVSYL--TDLEISFEDSYGRRWMATV--CNYNGSLAIRQGWDKFSAEHDLKVGEFLVFHYVS-DDLN 110
55666..3334445689999999999877..4568***************..********************************98.6777 PP
.EEEEE-S CS
B3 92 lvvkvfrk 99
+ v++f +
Solyc10g053890.1.1 111 FIVQIFGT 118
79999976 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 167 aa
Download sequence Send
to blast |
MKLLEMMGAF YDNEDGLLIN GKKVISFFKV MILETFLQVL CFPPKIARSV SYLTDLEISF 60 EDSYGRRWMA TVCNYNGSLA IRQGWDKFSA EHDLKVGEFL VFHYVSDDLN FIVQIFGTSG 120 CEKIKFSCNI GKEKPKERTY QEITTTEECQ SGKLFVHKFF RVILFL*
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