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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc10g049870.1.1 |
Common Name | LOC101255146 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
C2H2 |
Protein Properties |
Length: 173aa MW: 19498 Da PI: 10.5943 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc10g049870.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 11.8 | 0.00076 | 46 | 68 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C+ C++ F ++ L H++ H
Solyc10g049870.1.1 46 FSCNFCKRKFYSSQALGGHQNAH 68
89******************988 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 173 aa
Download sequence Send
to blast |
MRRAEDGYQG TSVLDQGEWL NLSLGRNLPS ISKESESHIP TSGKVFSCNF CKRKFYSSQA 60 LGGHQNAHKR ERGTVRQYQS QRMMTMMALP INNPMFRSLG MIPHSLLHKS SRDARATAAT 120 FSEASAGYQR TSLTNQMDRS FDLKWPGSFQ LNQQQTKDHT TNPTKLDLNL KL*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC244957 | 0.0 | Solanum lycopersicum strain Heinz 1706 chromosome 10 clone sle-1i2 map 10, complete sequence |