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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Solyc10g008880.2.1 |
| Common Name | LOC101251820 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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| Family |
VOZ |
| Protein Properties |
Length: 478aa MW: 53537.7 Da PI: 6.3614 |
| Description |
VOZ family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Solyc10g008880.2.1 | genome | ITAG | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | VOZ | 413.9 | 2.9e-127 | 199 | 418 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewl...qdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaataks 88
pppsaflgpkcalwdc+rpa gs+w+ qdycs +ha+la neg pg pv+rp gi+lkd+llf+al ak++gkevg+pecegaataks
Solyc10g008880.2.1 199 PPPSAFLGPKCALWDCPRPAMGSDWCqksQDYCSDYHASLAPNEGYPGRPPVVRPMGIGLKDNLLFQALGAKAHGKEVGVPECEGAATAKS 289
89***********************944459************************************************************ PP
VOZ 89 pwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeinelda 179
pwna+elfdl+++ege irewlffdkprrafesgnrkqrslpdy+grgwhesrkq+m+efgglkrsyymdpqp++++ewhlyeyein++da
Solyc10g008880.2.1 290 PWNAPELFDLKVVEGEVIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQMMNEFGGLKRSYYMDPQPMKNLEWHLYEYEINKYDA 380
******************************************************************************************* PP
VOZ 180 lalyrlelklvdekksakgkvskdsladlqkklgrlta 217
+alyrlelklvd+kk +kgk+s+ s+adlqk++grlta
Solyc10g008880.2.1 381 CALYRLELKLVDGKKIPKGKISNVSVADLQKQMGRLTA 418
************************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009408 | Biological Process | response to heat |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009631 | Biological Process | cold acclimation |
| GO:0009816 | Biological Process | defense response to bacterium, incompatible interaction |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0048578 | Biological Process | positive regulation of long-day photoperiodism, flowering |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 478 aa
Download sequence Send
to blast |
MRKVSKRGAC KSASHQLFKD RAKNRVDDLQ GVLTNLQSAR KESRTYDVGL LEEQVHQMLR 60
EWKSELNEPS PASSLQGGSR VSSSADIYRL LLGEEEDDAT SALAAPKPEP DAQKVSITGF 120
QEGFNVTQVL QEQGFQLVDQ CKGLPLMVNN TGVNNLGIAT QLDYHSFDLH REYDQQYLPG 180
FDALNLCLED AMPPIHISPP PSAFLGPKCA LWDCPRPAMG SDWCQKSQDY CSDYHASLAP 240
NEGYPGRPPV VRPMGIGLKD NLLFQALGAK AHGKEVGVPE CEGAATAKSP WNAPELFDLK 300
VVEGEVIREW LFFDKPRRAF ESGNRKQRSL PDYNGRGWHE SRKQMMNEFG GLKRSYYMDP 360
QPMKNLEWHL YEYEINKYDA CALYRLELKL VDGKKIPKGK ISNVSVADLQ KQMGRLTAEF 420
PLDNKRTVKG RVKANMKNMG NIHAAPVPIV PIGEGFDYGN TDPYDYLLDD LDGYFIT*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
| Publications
? help Back to Top |
- Wang Y,van der Hoeven RS,Nielsen R,Mueller LA,Tanksley SD
Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments.
Theor. Appl. Genet., 2005. 112(1): p. 72-84
[PMID:16208505] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Yasui Y,Kohchi T
VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
[PMID:25351333] - Kumar S,Choudhary P,Gupta M,Nath U
VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
Plant Physiol., 2018. 176(4): p. 2917-2930
[PMID:29507119] - Song C,Lee J,Kim T,Hong JC,Lim CO
VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
Planta, 2018. 247(6): p. 1439-1448
[PMID:29536220]
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