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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Solyc09g098110.2.1 |
| Common Name | LOC101263058 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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| Family |
bHLH |
| Protein Properties |
Length: 358aa MW: 37935.8 Da PI: 8.2481 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Solyc09g098110.2.1 | genome | ITAG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 33.4 | 7.8e-11 | 290 | 335 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+++Er RR ri ++ +L++l+P+ +k s a++L +Av++I+ Lq
Solyc09g098110.2.1 290 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYADMLDLAVQHIRTLQ 335
689*********************7....688*****************9 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010119 | Biological Process | regulation of stomatal movement |
| GO:0045944 | Biological Process | positive regulation of transcription from RNA polymerase II promoter |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005829 | Cellular Component | cytosol |
| GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
| GO:0001228 | Molecular Function | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 358 aa
Download sequence Send
to blast |
MYPSSTSSSS QGSMSHTSTT AGGAGGGLTR YGSAPGSFLT TAVEAVVNGN HEFASHGSHH 60
SHLGPSRFFQ SNLASTSLNS ESTSKAKEQS NLQRSIGFND LTIGGGSGAG GGVLPTTSTT 120
PLVRHSSSPA RFLNQLATAA GDTVSMGRGS YNPKGGGDSG RGITRLNSQL SFTTQEALSQ 180
IAEENEDIEG TSIANGHRKS THSYASASSF AMGSWEDNNS IMFSVTPSKR SKQISNDIVN 240
GLDDGETQFQ FGLSQTALEI ASMDRLLHIP EDSVPCKIRA KRGCATHPRS IAERERRTRI 300
SGKLKKLQDL VPNMDKQTSY ADMLDLAVQH IRTLQDQVQN LNTELENCKC GCRKSSQ*
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EF647603 | 0.0 | Solanum lycopersicum chromosome 9 clone C09HBa0109D11, complete sequence |
| GenBank | EU139072 | 0.0 | Solanum lycopersicum chromosome 9 clone C09HBa0226D21, complete sequence |
