|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Solyc09g089600.1.1 |
Common Name | LOC101258995 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
Family |
C2H2 |
Protein Properties |
Length: 192aa MW: 22199.7 Da PI: 5.8628 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc09g089600.1.1 | genome | ITAG | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 14.4 | 0.00011 | 34 | 56 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C+ C++ F++ L H++ H
Solyc09g089600.1.1 34 YECNFCKRGFTNAQALGGHMNIH 56
99*******************99 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 192 aa
Download sequence Send
to blast |
MASEKINNYS DSSSEDTTID RESEKFNDGI GRSYECNFCK RGFTNAQALG GHMNIHRKDK 60 LKAKQNNQES STKLSKEANY VFDNSRYNNN NNYAPISSHD ELQHHDHYSR AQMNSYQFHF 120 QLPQNPNHNQ HIYNQHHDGS RTRHENYYDG NNLSLRIGPT LIDDDDEEGE GKKDVDESEL 180 DLELRLGYSN H*
|