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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Solyc09g075420.2.1 |
| Common Name | ERF2 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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| Family |
ERF |
| Protein Properties |
Length: 261aa MW: 29638.1 Da PI: 4.7182 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Solyc09g075420.2.1 | genome | ITAG | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 60.4 | 4.2e-19 | 61 | 109 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a+++ ++k++g
Solyc09g075420.2.1 61 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARKIRG 109
9*******.**********954...4************************998 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0006629 | Biological Process | lipid metabolic process |
| GO:0034059 | Biological Process | response to anoxia |
| GO:0035556 | Biological Process | intracellular signal transduction |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0004435 | Molecular Function | phosphatidylinositol phospholipase C activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 261 aa
Download sequence Send
to blast |
MCGGAILADI IPPRDRRLSS TDLWPTDFWP ISTQNVPLNP KRARPSTGGE QMKKRQRKNL 60
YRGIRQRPWG KWAAEIRDPR KGVRVWLGTF NTAEEAARAY DREARKIRGK KAKVNFPNED 120
DDHYCYSHPE PPPLNIACDT TVTYNQESNN CYPFYSIENV EPVMEFASYN GIEDGGEEMV 180
KNLNNRVVEE EEKTEDEVQI LSDELMAYES LMKFYEIPYV DGQSVAATVN PAAETAVGGG 240
SMELWSFDDV SRLQPSYNVV *
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1gcc_A | 3e-22 | 61 | 117 | 3 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
| 5wx9_A | 1e-21 | 61 | 119 | 15 | 74 | Ethylene-responsive transcription factor ERF096 |
| Search in ModeBase |
| Function -- GeneRIF ? help
Back to Top |
- Overexpression of the ERF2 gene in transgenic tomato lines results in premature seed germination and enhanced hook formation of dark-grown seedlings, which is indicative of increased ethylene sensitivity.
[PMID: 16857696] - ERF2 has a regulatory role in activating the expression of biosynthesis genes and ethylene production in tomato.
[PMID: 19261734] - Results establish that LeERF2 enhances freezing tolerance of plants through ethylene biosynthesis and the ethylene signaling pathway.
[PMID: 20135196]
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY496704 | 0.0 | Lycopersicon esculentum ethylene-binding protein mRNA, complete cds |
| Publications
? help Back to Top |
- Tournier B, et al.
New members of the tomato ERF family show specific expression pattern and diverse DNA-binding capacity to the GCC box element.
FEBS Lett., 2003. 550(1-3): p. 149-54
[PMID:12935902] - Wang Y,van der Hoeven RS,Nielsen R,Mueller LA,Tanksley SD
Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments.
Theor. Appl. Genet., 2005. 112(1): p. 72-84
[PMID:16208505] - Pirrello J, et al.
Sl-ERF2, a tomato ethylene response factor involved in ethylene response and seed germination.
Plant Cell Physiol., 2006. 47(9): p. 1195-205
[PMID:16857696] - Zhang Z,Zhang H,Quan R,Wang XC,Huang R
Transcriptional regulation of the ethylene response factor LeERF2 in the expression of ethylene biosynthesis genes controls ethylene production in tomato and tobacco.
Plant Physiol., 2009. 150(1): p. 365-77
[PMID:19261734] - Zhang Z,Huang R
Enhanced tolerance to freezing in tobacco and tomato overexpressing transcription factor TERF2/LeERF2 is modulated by ethylene biosynthesis.
Plant Mol. Biol., 2010. 73(3): p. 241-9
[PMID:20135196]
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