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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc09g065660.2.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
HSF |
Protein Properties |
Length: 373aa MW: 42442.4 Da PI: 5.0543 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc09g065660.2.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 116.5 | 1.6e-36 | 43 | 134 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkke 92
Fl+k+ye+++d+++++++sw++ g+sfvv+d+++f++++Lpk+Fkh+nf+SFvRQLn+YgF+k++ e+ weF+++ F kg+k+
Solyc09g065660.2.1 43 FLTKTYEMVDDSSTDHIVSWNRGGQSFVVWDPHSFSTTLLPKFFKHNNFSSFVRQLNTYGFRKIDPER---------WEFANEAFLKGSKH 124
9****************************************************************999.........************** PP
XXXXXXXXXX CS
HSF_DNA-bind 93 llekikrkks 102
ll++ikr+k+
Solyc09g065660.2.1 125 LLRNIKRRKT 134
********97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 373 aa
Download sequence Send
to blast |
MNQLYSVKEE FPGSSSGGGG GGEPPPATPQ PMEGLHDIGP PPFLTKTYEM VDDSSTDHIV 60 SWNRGGQSFV VWDPHSFSTT LLPKFFKHNN FSSFVRQLNT YGFRKIDPER WEFANEAFLK 120 GSKHLLRNIK RRKTPNSSQP LPSTEQGLGP CVELGRFGFD GEVDRLRRDK QVLMTELVKL 180 RQNQQNTRAY LRSLEVRLQG TERKQQQMMN FLARAMQNPE FVQQLIQQKG KRREIEEDIT 240 KKRRRPIDPQ GPSATLHVGG SSHSIKSEPL EFGEANEFQV SELEALALEM QGYGRARKDQ 300 QEEYTIEGLE QFGNTDKELD VGFWEELFND EDVSGNEDGE EEDVDVLAES EFSSIQRRMK 360 KAAIWIDQLL VG*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 230 | 244 | KRREIEEDITKKRRR |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GU120360 | 2e-09 | Solanum lycopersicum heat stress transcription factor A3 (HSFA3) mRNA, complete cds |