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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc09g059520.2.1 |
Common Name | LOC101251320 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
HSF |
Protein Properties |
Length: 390aa MW: 44921.5 Da PI: 4.4025 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc09g059520.2.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 111.4 | 6.3e-35 | 14 | 106 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkke 92
Fl k ye++ede+++ lisw+++++sf+++d +f++++LpkyFkhsnf+SF+RQLn+YgF+k+++++ weF ++sF kg+k+
Solyc09g059520.2.1 14 FLLKCYEMVEDESTDGLISWNQSEKSFIIWDVPKFSSELLPKYFKHSNFSSFIRQLNIYGFHKTDTDR---------WEFLNDSFVKGQKH 95
9***************************************************************9999.........************** PP
XXXXXXXXXXX CS
HSF_DNA-bind 93 llekikrkkse 103
l++i r+k++
Solyc09g059520.2.1 96 FLKNIVRRKQS 106
*******9986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 390 aa
Download sequence Send
to blast |
MVKSFENGVS VAPFLLKCYE MVEDESTDGL ISWNQSEKSF IIWDVPKFSS ELLPKYFKHS 60 NFSSFIRQLN IYGFHKTDTD RWEFLNDSFV KGQKHFLKNI VRRKQSSVAQ KKPSQLEEIK 120 SCTSEESKNL ELWKEVENLK DERNVLTQEL VKLKEHQQNS ESKLILLREQ LKVREKNQQQ 180 MLSFIVMAMQ SPSFLVQFFQ PKENSWCMSE NGNNILSEVE DDCVDTPSDR AIVRYHPPTH 240 EEAAETLLCA EPEPALDSQK PMELDFSSNE LKDMFSNIDF FSGLMDEKLL AFENRVPLTL 300 PYHPDDDNLL EQLLLSSPIT ENNEGEVMDN PACSHTGMET DLESGTFSGS EEPFHSLEDK 360 KMEMDLLETQ SDNLSNMDIL AEQLGHSKF*
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