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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc09g010920.1.1 |
Common Name | LOC101249397 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
GRAS |
Protein Properties |
Length: 762aa MW: 86040.7 Da PI: 6.1996 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc09g010920.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 375.3 | 8e-115 | 387 | 759 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91
l++l+++cA+av+++d + a++lL+++++++sp gd +qRla++f+ +L+arla+++s++ykal ++ts ++ l+a++l+ sP+
Solyc09g010920.1.1 387 LRTLMINCAQAVAADDSRIANELLKQIRQHSSPFGDGNQRLAHCFADGLEARLAGTGSQIYKALVNKRTS---AADLLKAYHLYLASSPFR 474
57899***********************************************************999998...9***************** PP
GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
k+s ++ N++I+ +e+++rvH+iDf+i +G+QWp+++q +a+R++gpp+lRiTg++ p++g +e++eetg+rLa++A++++vpfe+++
Solyc09g010920.1.1 475 KISSFASNKTIMLKAENATRVHVIDFGILYGFQWPTFIQRIAEREGGPPRLRITGIEFPQPGfrPAERIEETGRRLADYARSFNVPFEYHA 565
*************************************************************9***************************** PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
+ak++e++++e+L+++++E laVn+ ++ ++l+de+ ++es r+ vL+lv++++P+++v+ + ++++ F++rf eal ++salfd l
Solyc09g010920.1.1 566 -IAKKWESITVEDLKLDKDEFLAVNCLYRFKNLHDETIAVESSRTIVLNLVRKINPDIFVHGIVNGAYSAPFFVTRFREALFHFSALFDIL 655
.7***************************************************************************************** PP
GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsek.aakqaklllrkvksdgyrveeesgslvlg 361
e+ +pre er+ +Ere++gre+ nv+aceg er+er et+++W++r++ a F+++p++ + +++a +r + + + ++e+s++l+lg
Solyc09g010920.1.1 656 ETIVPREIPERRLIEREIFGREALNVIACEGWERVERPETYKQWQARIMGARFTQIPFDREeFVNKAIEKVRLGYHRDFVIDEDSQWLLLG 746
**********************************************************86515677777888888788************* PP
GRAS 362 WkdrpLvsvSaWr 374
Wk+r+++++S+W+
Solyc09g010920.1.1 747 WKGRTIYALSCWK 759
************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 762 aa
Download sequence Send
to blast |
MDPRFNGHRS SLNNFRFGNQ PLPFSSEQRM INVPRFGLIY SDQNLLNGPR LENNFVQHDF 60 GAVGFISGDH LPTSVESRTD LGVENDFNED IDFSDAVLSY INRMLMEEDM EDKTDMLQES 120 LELQAKEKSL YEALGKKYPP SLEQNVFTVR NSESPDDYVA GSIYNSTSNT GDSSGYLVDP 180 RGVNISTDCN SSYFEGLSFH NTSSLCSSNS GSNVVDGFLD SPVSSFRIPD IYDESRSILN 240 FQKGVEEASK FLPTSNKLLN SIDINGLPSR EPHRQTAYAA AQVEEKDEGE TSPTEGRGKK 300 NPLRGDNNIE EERSSKQAAV FTESTLRSEE FDIVLLNSMG KGGEALEAYQ QNLRNAKSKT 360 TVQISKKSKG GKGRGKKQGG KKEVIDLRTL MINCAQAVAA DDSRIANELL KQIRQHSSPF 420 GDGNQRLAHC FADGLEARLA GTGSQIYKAL VNKRTSAADL LKAYHLYLAS SPFRKISSFA 480 SNKTIMLKAE NATRVHVIDF GILYGFQWPT FIQRIAEREG GPPRLRITGI EFPQPGFRPA 540 ERIEETGRRL ADYARSFNVP FEYHAIAKKW ESITVEDLKL DKDEFLAVNC LYRFKNLHDE 600 TIAVESSRTI VLNLVRKINP DIFVHGIVNG AYSAPFFVTR FREALFHFSA LFDILETIVP 660 REIPERRLIE REIFGREALN VIACEGWERV ERPETYKQWQ ARIMGARFTQ IPFDREEFVN 720 KAIEKVRLGY HRDFVIDEDS QWLLLGWKGR TIYALSCWKP V*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in cotyledons, leaves and flowers, and in the elongation zone in root. {ECO:0000269|PubMed:18500650}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |