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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Solyc08g077000.1.1 |
Common Name | LOC101259870 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
C2H2 |
Protein Properties |
Length: 279aa MW: 31080.8 Da PI: 6.3359 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc08g077000.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 14.1 | 0.00014 | 81 | 103 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C+ C + F++ L H+++H
Solyc08g077000.1.1 81 YTCTFCRREFRSAQALGGHMNVH 103
9********************99 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 279 aa
Download sequence Send
to blast |
MAAELGILSS TQLQKLAQSQ EQHSQQQLSS LQPPFNPDSV TDCWMWNAKQ ATQDDDDSWE 60 VRAFEEDTGN AMGTTWPPRS YTCTFCRREF RSAQALGGHM NVHRRDRARL HQAPPQYASN 120 SIHNHNHNHI SSQNSNSTFL VPTQEFVTNG GLCLLYSLPN PSNTHIFNNP TSRKSCTMNN 180 NSSSSSTLNL SISPYPTNNN LMSPTTPYPT PTSLNFPINK PNPRICNTSN DDDNNNNNHD 240 YGSNKRDSLI EDELDLELRL GWRSSSSTTT TTTTTSSP*
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