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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc08g061130.2.1 |
Common Name | HY5 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
bZIP |
Protein Properties |
Length: 159aa MW: 17341.2 Da PI: 10.4138 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc08g061130.2.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 46.2 | 1e-14 | 84 | 144 | 1 | 61 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61
+ke kr +r+ +NR++A+ R+RKka++ Le +vkeLe++N +L ++l++l++e + l+
Solyc08g061130.2.1 84 DKENKRLKRLLRNRVSAQQARERKKAYLIDLEARVKELETKNAELEERLSTLQNENQMLRH 144
5899****************************************************98865 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009585 | Biological Process | red, far-red light phototransduction |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
GO:0010099 | Biological Process | regulation of photomorphogenesis |
GO:0010114 | Biological Process | response to red light |
GO:0010218 | Biological Process | response to far red light |
GO:0010224 | Biological Process | response to UV-B |
GO:0031539 | Biological Process | positive regulation of anthocyanin metabolic process |
GO:0042753 | Biological Process | positive regulation of circadian rhythm |
GO:0080167 | Biological Process | response to karrikin |
GO:0005634 | Cellular Component | nucleus |
GO:0003690 | Molecular Function | double-stranded DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 159 aa
Download sequence Send
to blast |
MQEQATSSIA ASSLPSSSER SSSSALHHEL KEGMESDDEI RRVPEMGGEA TGTTSASGRD 60 GVSAAGQAQP SAGTQRKRGR SPADKENKRL KRLLRNRVSA QQARERKKAY LIDLEARVKE 120 LETKNAELEE RLSTLQNENQ MLRHILKNTT AGAQEGRK*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light-induced genes. {ECO:0000269|PubMed:15178762}. |
Function -- GeneRIF ? help
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- Through binding to the promoter of ABI5, HY5 triggers enhanced photoprotection through induction of an apoplastic H2O2 burst that influences antioxidant status, cyclic electron flux(CEF), and nonphotochemical quenching(NPQ). This enhanced photoprotection allows shade leaves to avoid photoinhibition. [HY5]
[PMID: 29146776] - mediates CRY1a-induced anthocyanin biosynthesis
[PMID: 29566255] - Long hypocotyl 5 protein inhibits tomato growth and induces cold tolerance by integrating both light and temperature signaling.
[PMID: 30563923]
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Publications
? help Back to Top |
- Liu Y, et al.
Manipulation of light signal transduction as a means of modifying fruit nutritional quality in tomato. Proc. Natl. Acad. Sci. U.S.A., 2004. 101(26): p. 9897-902 [PMID:15178762] - Wang F, et al.
Light Signaling-Dependent Regulation of Photoinhibition and Photoprotection in Tomato. Plant Physiol., 2018. 176(2): p. 1311-1326 [PMID:29146776] - Liu CC, et al.
The bZip transcription factor HY5 mediates CRY1a-induced anthocyanin biosynthesis in tomato. Plant Cell Environ., 2018. 41(8): p. 1762-1775 [PMID:29566255] - Wang F, et al.
SlHY5 Integrates Temperature, Light, and Hormone Signaling to Balance Plant Growth and Cold Tolerance. Plant Physiol., 2019. 179(2): p. 749-760 [PMID:30563923]
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