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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc08g005780.2.1 |
Common Name | LOC101251494 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
BES1 |
Protein Properties |
Length: 667aa MW: 75255.5 Da PI: 6.5104 |
Description |
BES1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc08g005780.2.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF822 | 159.1 | 2.9e-49 | 60 | 202 | 3 | 143 |
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspess 93
+ rk+++kE+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+Vl+AL+r+AGw+ve+DGtt+r+ p ++a+ +g+ + +s+es+
Solyc08g005780.2.1 60 KSRKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPVRADMNDVLAALARQAGWTVEPDGTTFRQTPAPVNNASNMGTYQVMSVESP 150
579**************************************************************************************** PP
DUF822 94 lq.sslkssalaspvesysaspksssfpspssldsislasa.asllpvlsvl 143
++ ss +++++++ v+ + ++++ ++++sp+s+dsi ++++ +++ +++s+
Solyc08g005780.2.1 151 VSgSSFRNCSTRASVDCQPSVTRINESLSPASFDSIVVTESdTKVDKFTSTS 202
************************************9998865555555544 PP
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Protein Features
? help Back to Top |
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Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
Pfam | PF05687 | 1.7E-50 | 60 | 205 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
SuperFamily | SSF51445 | 1.82E-158 | 228 | 660 | IPR017853 | Glycoside hydrolase superfamily |
Gene3D | G3DSA:3.20.20.80 | 1.7E-170 | 230 | 660 | IPR013781 | Glycoside hydrolase, catalytic domain |
Pfam | PF01373 | 4.3E-82 | 253 | 623 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.6E-52 | 268 | 282 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.6E-52 | 289 | 307 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.6E-52 | 311 | 332 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.6E-52 | 404 | 426 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.6E-52 | 477 | 496 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.6E-52 | 511 | 527 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.6E-52 | 528 | 539 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.6E-52 | 546 | 569 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.6E-52 | 582 | 604 | IPR001554 | Glycoside hydrolase, family 14 |
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0000272 | Biological Process | polysaccharide catabolic process |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0048831 | Biological Process | regulation of shoot system development |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0016161 | Molecular Function | beta-amylase activity |
Sequence ? help Back to Top |
Protein Sequence Length: 667 aa
Download sequence Send
to blast |
MSNPHHHISN TQDPDPQFPN PNDDPNPTHH LQPQSNPQPR RPRGFAATSA AAAATGTINK 60 SRKEREKEKE RTKLRERHRR AITSRMLAGL RQYGNFPLPV RADMNDVLAA LARQAGWTVE 120 PDGTTFRQTP APVNNASNMG TYQVMSVESP VSGSSFRNCS TRASVDCQPS VTRINESLSP 180 ASFDSIVVTE SDTKVDKFTS TSPMNSAGCL EAGQLMQELH CGEHGGSFSE TQYVPVFVML 240 SSGVINNFCQ LMDPDGVKQE LQQLKSLKID GVVVNCWWGI VESWVPQKYE WSGYRELFKI 300 IRDFNMKLQV VMAFHENGGS DTGGMFISLP QWVLEIGKDN QDIFFTDHQG RRNTECLSWG 360 IDKERVLRGR TAIEVYFDLM RSFRTEFDDL FTDGLISAVE IGLGASGELK YPSFSERMGW 420 RYPGIGEFQC YDKYSLQNLR KAATSRGHSF WAKGPDNAGF YNAKPHETGF FCERGDYDSY 480 YGRFFLHWYR QVLIDHANNV LTLASLAFEG IQIVVKIPSI YWWYRTSSHA AELTAGYYNP 540 TNQDGYSPVF EVLKKHSVTI KFVSSGLQVP ETDDALADPE GLSWQIINSA WDKKITVAGQ 600 NAFPCYDREG FMRLVETAKP RNDPDRHRFS FFAFQQPSPL VQSAICFSEL DYFIKCMHGE 660 INNVES*
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