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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Solyc07g062790.1.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
HD-ZIP |
Protein Properties |
Length: 175aa MW: 20255.1 Da PI: 8.5965 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc07g062790.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 57.6 | 2.2e-18 | 17 | 71 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
++ ++++eq++ Le+ F ++++++ e++ +L+++lg++ rq+++W+qNrRa++k+
Solyc07g062790.1.1 17 NKKRLNQEQVKLLEASFDSTKKLDLEKKLQLSRELGVPPRQISIWYQNRRARWKN 71
56789************************************************95 PP
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2 | HD-ZIP_I/II | 97.9 | 9.8e-32 | 17 | 108 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
+k+rl++eqvklLE sF++++kL+ e+K +l+reLg+ prq+ +W+qnrRAR+k++ +E+dy+aL+ ++++ +e+ Leke++ L+ el+
Solyc07g062790.1.1 17 NKKRLNQEQVKLLEASFDSTKKLDLEKKLQLSRELGVPPRQISIWYQNRRARWKNQSMENDYNALQLKLENALSEKMLLEKETKILQGELE 107
79*************************************************************************************9997 PP
HD-ZIP_I/II 93 e 93
+
Solyc07g062790.1.1 108 K 108
6 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 175 aa
Download sequence Send
to blast |
MNSSFNSQNL QKYSKHNKKR LNQEQVKLLE ASFDSTKKLD LEKKLQLSRE LGVPPRQISI 60 WYQNRRARWK NQSMENDYNA LQLKLENALS EKMLLEKETK ILQGELEKAN EMLIGLKSGA 120 QGQIREFTLS TCCEDLISYS TTTRVPNDEV NYSNLQFDEL YAMIGMSNKC CSTW*
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