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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Solyc07g062710.2.1 | ||||||||
Common Name | LOC101263229 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family | bZIP | ||||||||
Protein Properties | Length: 303aa MW: 33590.2 Da PI: 5.9195 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.9 | 1.6e-11 | 182 | 227 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ Solyc07g062710.2.1 182 KRIKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 227 899**********************************999987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.5E-14 | 178 | 242 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.68 | 180 | 232 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.9E-10 | 182 | 227 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 6.3E-14 | 182 | 233 | No hit | No description |
SuperFamily | SSF57959 | 1.13E-11 | 182 | 236 | No hit | No description |
CDD | cd14703 | 2.40E-24 | 183 | 233 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 185 | 200 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence Send to blast |
MAQLPPKVPT MAHNWPFQNM PPLPNSSTIV SNHHTTNSWV DDFLDFSSSR RNSHRRSVSD 60 PIAFVEAPFL QQCRGNGLSN GFDKLDDELL TTMFSDDSGA GAAFAGTAPC SNPSSTNPST 120 PSDQVSENED QKSPVRLEVN LVVQPKNEPG EDDSDNQSPV TSKNPVNDSS DNNNNNSIVD 180 PKRIKRILAN RQSAQRSRVR KLQYISELER SVTTLQTEVS ALSPRVAFLD HQRLLLNVDN 240 SALRQRIAAL AQDKIFKDAH QEALKKEIER LRQIYHEQNM KKMNTADEPP STAAPMSCTE 300 EA* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Les.9935 | 0.0 | leaf| root |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 7412644 | 0.0 |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Solyc07g062710.2.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004244256.1 | 0.0 | basic leucine zipper 61-like | ||||
Swissprot | Q9M2K4 | 9e-89 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | A0A3Q7IAY7 | 0.0 | A0A3Q7IAY7_SOLLC; Uncharacterized protein | ||||
STRING | Solyc07g062710.2.1 | 0.0 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1775 | 24 | 65 | Representative plant | OGRP126 | 17 | 181 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 8e-64 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Solyc07g062710.2.1 |
Entrez Gene | 101263229 |
Publications ? help Back to Top | |||
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