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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Solyc07g062260.2.1 |
Common Name | LOC101247043 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
BES1 |
Protein Properties |
Length: 316aa MW: 33828 Da PI: 8.8962 |
Description |
BES1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc07g062260.2.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF822 | 210 | 6.3e-65 | 2 | 145 | 1 | 150 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspe 91
++++r+ptwkErEnnkrRERrRRaiaaki+aGLR++Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+e+ + g s+s sp+
Solyc07g062260.2.1 2 TSGTRMPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYQLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPMERLDFLGGSTSLSPC 92
5899*************************************************************************************** PP
DUF822 92 sslqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
ss+q +sp +s ++sp+sssfpsp+s++ + + + +sl+p+l++ls+ sss+
Solyc07g062260.2.1 93 SSYQ--------PSPFTSNNPSPASSSFPSPASSSYAANLNMdgKSLIPWLKNLSSGSSSA 145
****........9****************9988766554433459*********9966654 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 316 aa
Download sequence Send
to blast |
MTSGTRMPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY QLPKHCDNNE VLKALCNEAG 60 WTVEPDGTTY RKGCKPMERL DFLGGSTSLS PCSSYQPSPF TSNNPSPASS SFPSPASSSY 120 AANLNMDGKS LIPWLKNLSS GSSSASSSKL PNFHIHTGSI SAPVTPPFSS PTARTPRIKT 180 DAGWAGFRYP YLPSSTPASP GRQNFINAEC FAGISGPPSP TYSLVSPNPF GFKMDGLSRG 240 GSRMCTPGQS GACSPAIAAG LDHNADVPMA EVMISDEFAF GSNVAGMVKP WEGERIHEDC 300 VPDDLELTLG SSKTR*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5zd4_A | 1e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 1e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 1e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 1e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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