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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc07g055710.2.1 |
Common Name | LOC101259859 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
HSF |
Protein Properties |
Length: 389aa MW: 44375.1 Da PI: 6.5176 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc07g055710.2.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 108.5 | 5.1e-34 | 16 | 106 | 2 | 101 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkke 92
Fl k+ye+++d+ ++ ++sws+ng+sfvv+++ efa+++LpkyFkh+nf+SF+RQLn+YgF+kv+ e+ weF+++ F +g+++
Solyc07g055710.2.1 16 FLLKTYELVDDSYTNPVVSWSHNGRSFVVWNPPEFARDLLPKYFKHNNFSSFIRQLNTYGFRKVDPEQ---------WEFANEDFLRGRRH 97
9***************************************************************9998.........************** PP
XXXXXXXXX CS
HSF_DNA-bind 93 llekikrkk 101
ll++i r+k
Solyc07g055710.2.1 98 LLKNIYRRK 106
*******98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 389 aa
Download sequence Send
to blast |
MDNCNGGSSS SSPAPFLLKT YELVDDSYTN PVVSWSHNGR SFVVWNPPEF ARDLLPKYFK 60 HNNFSSFIRQ LNTYGFRKVD PEQWEFANED FLRGRRHLLK NIYRRKPIHS HSAAAGTGQS 120 VAPLTDSERQ EYEDEIERLK RENSLLQSSA ENQLKFNGEY ESGIKSMEQR LQNVAHRQGK 180 LISLLAQLLQ TPGFSSDFTQ SASRKRRLLI SNYLIDEENS PKFDLEMVKK LDSSINFWER 240 FLYGVQTQDF EHTHSPIVTH TSSNDSAKRN SPIDHSPSSS ELGPLNPVMS STYENLERQL 300 KPSDNQIECK TSKTSELVSN SGNDVFWQQF LTETPGCTEP QQVENKGINE STRDIRLGDS 360 HRYWWNRGVN LENLAERMGH LSSPATGS*
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