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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Solyc07g045550.1.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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| Family |
SAP |
| Protein Properties |
Length: 382aa MW: 43079.3 Da PI: 6.5617 |
| Description |
SAP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Solyc07g045550.1.1 | genome | ITAG | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SAP | 589.3 | 9.9e-180 | 6 | 381 | 79 | 454 |
SAP 79 vcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfad 169
vcstwravsrsdllwq+l++riW+r +ll+ tW++ey+y+hrt++nfr+ ry y tl+f a++d+dn+ d lsCr++alsd++laaGf+d
Solyc07g045550.1.1 6 VCSTWRAVSRSDLLWQNLSNRIWNRDRLLHPTWHDEYVYWHRTSNNFRQCRYVYRTLHFVRANNDDDNN-DGLSCRRIALSDRHLAAGFSD 95
9*************************************************************9888866.********************* PP
SAP 170 GavrlfdletrlhvstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGl 260
G+v+lf+l +r+h+st++pq+rdrlGr+sra+sGi++sd +lvfa+ldGdihv v+ a + ++rra lGdvvndGalvdf+G+grWw+Gl
Solyc07g045550.1.1 96 GSVQLFHLISRAHLSTYYPQQRDRLGRYSRAISGIILSDEKLVFASLDGDIHVVVLGEADQYPPRRARLGDVVNDGALVDFTGRGRWWIGL 186
**********************************************************9******************************** PP
SAP 261 yaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssld 351
yaGvpGrafh+W++ete+l+f G ltdPea++GWh+ltel++lvGrvrvt r+tavaCt +lvv+dl+nqg++lre+++++ liv+s+d
Solyc07g045550.1.1 187 YAGVPGRAFHVWNSETEQLIFADGDLTDPEALTGWHLLTELMDLVGRVRVTARDTAVACTGPQLVVIDLHNQGLILRERSFQHELIVGSFD 277
******************************************************************************************* PP
SAP 352 asneayvvvdsrGvatvrrvenleevcrfrvrg.aqrgvlgCvng.gyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvav 440
a+++++v+vd rGvatvrr e+l+e crf+vrg +qrgv+g +n gy++++ g v+rvWe+e+ + ylyslrer+gevna+ a++rh+ +
Solyc07g045550.1.1 278 ATSDSLVAVDGRGVATVRRTEDLDESCRFNVRGaSQRGVVGSMNSsGYGVMCVGEVIRVWEVENGV-YLYSLRERIGEVNAMHANERHIVA 367
*********************************9**********549*****************88.************************ PP
SAP 441 sssdgtihlldfga 454
+ssdgtihl+dfga
Solyc07g045550.1.1 368 CSSDGTIHLWDFGA 381
************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 382 aa
Download sequence Send
to blast |
MSFNLVCSTW RAVSRSDLLW QNLSNRIWNR DRLLHPTWHD EYVYWHRTSN NFRQCRYVYR 60
TLHFVRANND DDNNDGLSCR RIALSDRHLA AGFSDGSVQL FHLISRAHLS TYYPQQRDRL 120
GRYSRAISGI ILSDEKLVFA SLDGDIHVVV LGEADQYPPR RARLGDVVND GALVDFTGRG 180
RWWIGLYAGV PGRAFHVWNS ETEQLIFADG DLTDPEALTG WHLLTELMDL VGRVRVTARD 240
TAVACTGPQL VVIDLHNQGL ILRERSFQHE LIVGSFDATS DSLVAVDGRG VATVRRTEDL 300
DESCRFNVRG ASQRGVVGSM NSSGYGVMCV GEVIRVWEVE NGVYLYSLRE RIGEVNAMHA 360
NERHIVACSS DGTIHLWDFG A*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in inflorescence and floral meristems, young floral organ primordia, and later in ovule primordia. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC253601 | 0.0 | Solanum lycopersicum strain Heinz 1706 chromosome 7 clone slm-50p24 map 7, complete sequence |
| GenBank | AC253633 | 0.0 | Solanum lycopersicum strain Heinz 1706 chromosome 7 clone sle-4f18 map 7, complete sequence |
