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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Solyc07g021550.2.1 |
Common Name | LOC101254007 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
HRT-like |
Protein Properties |
Length: 457aa MW: 51051.8 Da PI: 10.1247 |
Description |
HRT-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc07g021550.2.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HRT-like | 49.7 | 5.9e-16 | 272 | 302 | 1 | 31 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31
iCGv+l++GsvC r+P g+KRC+eHKGm++
Solyc07g021550.2.1 272 ICGVALGHGSVCIRPPKTGNKRCAEHKGMKV 302
8****************************97 PP
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2 | HRT-like | 42.6 | 9.9e-14 | 330 | 359 | 1 | 30 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30
iCG+il+ G C r P + +KRC eHKG+R
Solyc07g021550.2.1 330 ICGFILDSGASCARIPFQRNKRCMEHKGRR 359
8****************************9 PP
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3 | HRT-like | 48.6 | 1.4e-15 | 419 | 449 | 1 | 31 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31
iCGv+l+dGs+C+ qP gRKRCe HK mR+
Solyc07g021550.2.1 419 ICGVHLNDGSFCTSQPTVGRKRCEGHKCMRV 449
8*****************************7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 457 aa
Download sequence Send
to blast |
MGAADKSFTR RLRREDCKRT KHDSSFSHWK ILVGPNDWED YLLGKEGTER YRTQNLPNCT 60 SCSGVYELGI AVSRRKAGRE ATRLDPDYIV PVYVGKSNNV RTRLQQYGRV GAHLENDYSN 120 SELHVGEIIS GPKRAGLFTE TFSRGFSIVY RWAPMNDNKD AERTEAQLLD KFDYAWNKGS 180 NGVRRHNAVL RKLDGISRKT HLPAFIRKLQ LSLEKQKGVR IKACEPLLLE NGSGFHDSFK 240 STNFLPQILK FGRSQPRIVS VNVGVNGDPN IICGVALGHG SVCIRPPKTG NKRCAEHKGM 300 KVNSVKSKLI AEGNGSTRPC VSIDEENSPI CGFILDSGAS CARIPFQRNK RCMEHKGRRN 360 RGSNSQPTTY KIGQWTHNPI LENRTSSSND CQHILSSKAG RQDSQDFSSS LIHQNYNVIC 420 GVHLNDGSFC TSQPTVGRKR CEGHKCMRVK EPISSN*
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