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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc07g005140.2.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
ARR-B |
Protein Properties |
Length: 666aa MW: 73325.8 Da PI: 7.2618 |
Description |
ARR-B family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc07g005140.2.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 87.5 | 1.3e-27 | 211 | 263 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
+r++W+ eLH++Fv av qL G+ekA+Pk+il+lm+v+gLt+e+v+SHLQkYRl
Solyc07g005140.2.1 211 ARVVWSIELHRKFVAAVGQL-GIEKAVPKRILDLMNVDGLTRENVASHLQKYRL 263
79******************.********************************8 PP
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2 | Response_reg | 81 | 4e-27 | 28 | 136 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS
Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalea 89
vl vdD+p+ ++ll +l+k +y +v+++++++ al++l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+++ +++ +
Solyc07g005140.2.1 28 VLAVDDDPICLKLLDGLLRKCQY-QVTTTSQARMALKMLRENRdrFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANSDTKLVRKG 116
799********************.***************999889*******************87754.558****************** PP
HHTTESEEEESS--HHHHHH CS
Response_reg 90 lkaGakdflsKpfdpeelvk 109
++ Ga d+l+Kp+ +eel++
Solyc07g005140.2.1 117 IDHGACDYLVKPVRIEELRN 136
******************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0000160 | Biological Process | phosphorelay signal transduction system |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 666 aa
Download sequence Send
to blast |
MTVEEIRGNM SGGERGNNYD NFPIGMRVLA VDDDPICLKL LDGLLRKCQY QVTTTSQARM 60 ALKMLRENRD RFDLVISDVH MPDMDGFKLL ELVGLEMDLP VIMLSANSDT KLVRKGIDHG 120 ACDYLVKPVR IEELRNIWQH VIRKKKVEPK SQSKSNDQDK SYQVSGESGR GQSPTGNVYP 180 NGKCNKKRKD EEDENDENGN DNEDPTTQKR ARVVWSIELH RKFVAAVGQL GIEKAVPKRI 240 LDLMNVDGLT RENVASHLQK YRLYLKRINS VQTQQANMVA ALGGRDYVRM GSLDGLGDFR 300 TLGGSGRYTH AALSSYSSGG MLGRLNSAAG LSVRNLAASQ LLQPSHGQNL SNSVNAFTKL 360 NPSIPPASQN ASLFQGIPAS LELDQLQQSK SSAHIPLDES RLLTTDVLGC SNNSLPNNPM 420 LLPGNPQQPL TGGGFGNQHS QNITPFSSDS FNTGVNGSSN FLEHGRCNDW QNSVQLSKFQ 480 SNSFPLTESF INSHLPQISA REAAAHLQNS PLDFTSTTSV SPPFEDSRGE IQFRQSMASA 540 VQSMNQTPSQ AWADNKQQYS HNSNNTFGNN LSSQVPNDGS MASLSHSMNQ NNENFGRRMD 600 MSLIGRSSGG SSTLVQHTEH EKLTPDSRTR SNEEYLLEPT KQQVGFSPQG YDSLDDLMTA 660 MKRRG*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}. |