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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Solyc06g074160.1.1 |
Common Name | LOC101264021 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
B3 |
Protein Properties |
Length: 255aa MW: 29496.7 Da PI: 5.5042 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc06g074160.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 49.7 | 6.8e-16 | 23 | 103 | 13 | 97 |
TT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
B3 13 sgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
l +p +f+++ g ++ s l +e + rsW+v + +k + +++++GW +Fv++n+L+ D + F + g+s+f vk++
Solyc06g074160.1.1 23 YLKLKIPSRFFKNLnGDIPVIS-LLEVEGSARRSWRVVI--EKIEEDFYFKGGWTKFVQDNNLENEDYLNFLYAGNSTF--SVKIY 103
44589******77687777776.999999999*******..**********************************9999..77776 PP
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2 | B3 | 56.8 | 4.1e-18 | 157 | 249 | 3 | 98 |
EE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
B3 3 kvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
+ ++++++++ +l +p +f +++ g+ + ++ +++g+sW v + ++s+r l+kGW+++ ++n+L +gD++ Fkl+++++f
Solyc06g074160.1.1 157 EIVMKKSNFSNMLLNFPSTFGKKYmkrGQ--VFE-KMATLQTDGKSWPVVV---RSSDRLKLRKGWRQYLQDNDLHVGDVLRFKLIDEENF 241
5677999*****************76333..344.5666677*********...8999*****************************9*** PP
..EEEEE- CS
B3 91 elvvkvfr 98
l+v ++r
Solyc06g074160.1.1 242 ILKVLIRR 249
99999997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 255 aa
Download sequence Send
to blast |
MERNYVGNGF PAFIKVYSPE TCYLKLKIPS RFFKNLNGDI PVISLLEVEG SARRSWRVVI 60 EKIEEDFYFK GGWTKFVQDN NLENEDYLNF LYAGNSTFSV KIYGTNGYLK QELNAIAELE 120 LHPLDEENPN EIQVVSPLAD EELDGSENSL VSVTLFEIVM KKSNFSNMLL NFPSTFGKKY 180 MKRGQVFEKM ATLQTDGKSW PVVVRSSDRL KLRKGWRQYL QDNDLHVGDV LRFKLIDEEN 240 FILKVLIRRI TFDC*
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