 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Solyc06g069460.1.1 |
Common Name | TCP6 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
Family |
TCP |
Protein Properties |
Length: 279aa MW: 30895.1 Da PI: 9.4107 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc06g069460.1.1 | genome | ITAG | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 95.9 | 7.8e-30 | 57 | 131 | 3 | 74 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...e 74
g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk ++WL+ + k +i++l+ ++ +++s + +
Solyc06g069460.1.1 57 GGKDRHSKVCTVKGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVVDWLIDATKDEIDKLPPLQIPPPSLShffS 131
79*************************************************************777763222221 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009965 | Biological Process | leaf morphogenesis |
GO:0030154 | Biological Process | cell differentiation |
GO:0045962 | Biological Process | positive regulation of development, heterochronic |
Sequence ? help Back to Top |
Protein Sequence Length: 279 aa
Download sequence Send
to blast |
MNSRKQETGS GVDTNNSKTT STTTATTIPS SSSSRQSSSW GGGFKNPRIV RVSRSFGGKD 60 RHSKVCTVKG LRDRRIRLSV PTAIQLYDLQ DRLGLSQPSK VVDWLIDATK DEIDKLPPLQ 120 IPPPSLSHFF STKDHHNLDF VDTGLFGKDR WIATTNDQES SNHLIFQSSN LGMLNTFSNS 180 WEPNSNLSLG PFGNYQDQYQ QQQNMPLIPS SSHHQQQQLY FCPTSSSTTT LSSLVPPYNS 240 HFHPNSIAPT LQLTTSPVKS SFSLQDHHQH NHKEGSGS*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | GQ496324 | 0.0 | Solanum lycopersicum TCP transcription factor 6 (TCP6) mRNA, complete cds |
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT5G60970.1 | 1e-42 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 |