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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc05g014260.2.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
ARR-B |
Protein Properties |
Length: 582aa MW: 65467.1 Da PI: 6.5997 |
Description |
ARR-B family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc05g014260.2.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 71.7 | 1.1e-22 | 198 | 251 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r++Wt +LH++Fv+av+q+ G +k Pk+il+lm+++ Lt+e+v+ HLQkYRl
Solyc05g014260.2.1 198 KARVVWTVDLHQKFVKAVNQI-GFDKVGPKKILDLMGIPWLTRENVARHLQKYRL 251
68*******************.9*******************************8 PP
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2 | Response_reg | 78.7 | 2e-26 | 24 | 132 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS
Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalea 89
vl+vdD+p+ +++l+++l+k y +v+++ ++eal l+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + +
Solyc05g014260.2.1 24 VLVVDDDPTWLKILEKMLKKCSY-QVTTCGLAREALYVLRERKdgFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKG 112
89*********************.***************999999**********************6644.8****************** PP
HHTTESEEEESS--HHHHHH CS
Response_reg 90 lkaGakdflsKpfdpeelvk 109
++ Ga d+l Kp+ ++el++
Solyc05g014260.2.1 113 VQHGACDYLLKPIRMKELRN 132
*****************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0000160 | Biological Process | phosphorelay signal transduction system |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009735 | Biological Process | response to cytokinin |
GO:0010082 | Biological Process | regulation of root meristem growth |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 582 aa
Download sequence Send
to blast |
MENSKTSVGF SSPRTDTFPA GLRVLVVDDD PTWLKILEKM LKKCSYQVTT CGLAREALYV 60 LRERKDGFDI VISDVNMPDM DGFKLLEHVG LEMDLPVIMM SVDGETSRVM KGVQHGACDY 120 LLKPIRMKEL RNIWQHVLRK KMQEARDIGN HELDQYDEVW ILNGAEILSG KKRKDFENKH 180 DEREMSDSRC VDSSSMKKAR VVWTVDLHQK FVKAVNQIGF DKVGPKKILD LMGIPWLTRE 240 NVARHLQKYR LYLTRLQKED EAKASFIGTK HPDVSSKEIC SSLSLQNSLD ACTDVTNEKY 300 GCVTGDKTIV QNGKSNICES KVKGVVSVPA AEPRSVVEDN FDPQTTGSKI GLNDSFGLVN 360 TNVKSAKVPI PYCSTGEAPQ PQYKQQDFKP HFRSANGLCH QLLPVVSHQI PVDRTQETCF 420 VNHTPSHEER DRHPDTKNRP SFFKTKNEVV GKFSPVESNV NLYQTVSHQQ TNFHTLEQMP 480 STTWRATSHN VVNGPQSSPG NLTLRSGSIV ASVGEEIHGA SIQGECFLAN NDLPNIEQFD 540 YNDPQPISGV PTYLYDTLRF DYEYPIDSLE GNVIDQGLFI I*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}. |